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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs34412914 chr2:99754030 A/AT TSGA10 chr2:99613724-99771427:- 0.57 5.56 9.38E-7 Box Plot
ACC rs34414318 chr8:71661108 T/TCACA XKR9 chr8:71581600-71702606:+ 0.71 6.74 1.29E-8 Box Plot
ACC rs34425941 chr19:52880612 C/T ZNF880 chr19:52873170-52889048:+ 0.83 7.75 3.22E-10 Box Plot
ACC rs34431207 chr16:58208782 G/GT CSNK2A2 chr16:58191811-58231824:- 0.68 5.47 1.31E-6 Box Plot
ACC rs34508469 chr8:71628463 G/A XKR9 chr8:71581600-71702606:+ 0.72 6.83 9.23E-9 Box Plot
ACC rs34515576 chr8:71933788 G/A XKR9 chr8:71581600-71702606:+ 0.64 5.98 2.11E-7 Box Plot
ACC rs34516809 chr2:88458356 ATT/AT THNSL2 chr2:88469814-88486155:+ 0.82 6.48 3.37E-8 Box Plot
ACC rs34532676 chr2:99764260 GTATC/G TSGA10 chr2:99613724-99771427:- 0.57 5.64 7.06E-7 Box Plot
ACC rs34558600 chr8:71586152 G/A XKR9 chr8:71581600-71702606:+ 0.68 6.86 8.24E-9 Box Plot
ACC rs34569554 chr17:62980286 T/C AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs34577522 chr7:64450927 G/GT INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs34615570 chr7:64734385 TG/T INTS4L1 chr7:64601603-64694600:+ 0.65 5.08 5.18E-6 Box Plot
ACC rs34636014 chr7:64453634 G/A INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs34639489 chr7:64452830 C/T INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs34677078 chr8:71617715 A/G XKR9 chr8:71581600-71702606:+ 0.72 6.83 9.23E-9 Box Plot